Processing math: 100%

C File suffices

Files generated during Orac-dr imaging data reduction have suffices denoting the processing step that created them. This appendix contains a list with short descriptions of what they mean. Most will be removed once a recipe has finished using them. So you will probably only see these files if you list the contents of directory $ORAC_DATA_OUT while the pipeline is running, or you interrupt the pipeline with CTRL/C, or something has gone wrong with the the recipe and pipeline has aborted, or you have commented out the ‘_TIDY’ primitive from the recipe, or you have set the ORAC_KEEP environment variable to 1.

Frame suffices




Suffix Stands for

Description




_adu ADU

Multiplied by the exposure time to convert the units to ADU (Michelle)

_bc Bias Corrected

Residual bias variations removed (ISAAC)

_bgl BackGround Limited

Whether or not each pixel is background limited, i.e. Poisson noise exceeds the read noise

_bp Bad Pixel

Co-added with the bad-pixel mask

_bpc Bad Pixel Cumulative

Cumulative bad-pixel mask (UIST)

_bpd Bad Pixel Data

Thresholded bias or dark frame for bad-pixel mask creation (UIST)

_cl CLone

Modifiable copy of IRCAM raw data

_db De-Biassed

The bias is actually zero, but it sets up various Ccdpack ancillary data for later processing

_dcb Differenced Chop Beams

The difference of the A- and B-beam signals of nodded data, as used by NOD_CHOP recipes

_dk DarK

Dark subtracted

_dp Differenced Pair

The difference of successive frames in a NOD recipe

_dta Distortion Transfomation Applied

Resampled for field distortion

_ess E-beam Sky Subtracted

Polarimetry target e-beam after sky subtraction

_ff Flat Field

Divided by the flat field

_fm Flat Masked

This has the flagged deviant pixels detected by the initial flat-field creation restored after object masking

_fpm Fabry-Perot Masked

After a mask is applied to exclude regions beyond the circle transmitted by the Fabry-Perot etalon.

_md Masked Deviants

Deviant pixels from the neighbourhood (usually 3 σ in 15×15-pixel region) flagged as bad

_nl Non-Linearity

The standard non-linearity correction has been applied (IRCAM only)

_nm Normalised to Mode

Normalised masked frames combined to make the flat field

_om Objects Masked

This has sources masked with bad values so that they do not bias the self flat field

_oss O-beam Sky Subtracted

Polarimetry target o-beam after sky subtraction




Suffix Stands for

Description




_qm Quadrant Masked

One of the quadrants is masked with bad pixels, created in QUADRANT_JITTER

_pov POisson Variance

Poisson variance added

_raw Raw copy

Copy of the raw data, but in output directory and has history recording enabled

_rnv Read Noise Variance

Variance created containing the readnoise

_ss Sky Subtracted

Global or local sky subtraction applied

_th THresholded

Non-physical values set to bad

_trn TRaNsform

The transformed or resampled data immediately prior to making a mosaic

_xpr X PRofile

Median of each row (ISAAC)

_ypr Y PRofile

Median of each column (ISAAC)

Group suffices




Suffix Stands for

Description




_An A beam Negative

Extracted negative A-beam source and region from chopped and nodded mosaic

_Ap A beam Positive

Extracted positive A-beam source and region from chopped and nodded mosaic

_Bn B beam Negative

Extracted negative B-beam source and region from chopped and nodded mosaic

_Bp B beam Positive

Extracted Positive B-beam source and region from chopped and nodded mosaic

_cab Combined A & B beams

Combined positive and negative images extracted from chopped and nodded mosaic

_cpc Column-Profile Corrected

Removed column pattern, likely arising from pickup

_fb Filled Bad pixels

Bad pixels in the mosaic are filled using smooth function of the neighbouring good pixels

_I Intensity

Polarisation intensity

_mos Mosaic

Final mosaic

_P Percentage

Percentage polarisation

_PI Polarisation Intensity

_Q Stokes Q

Stokes Q parameter

_qcab Quality Combining A & B beams

Quality map from combining positive and negative images extracted from chopped and nodded mosaic

_rpc Row-Profile Corrected

Removed row pattern, say due to bias variations

_scab Smoothed Combined A & B beams

Block-smoothed combined positive and negative images extracted from chopped and nodded mosaic

_sp Stokes Parameters

Data cube of Stokes parameters

_TH THeta

Polarisation angle

_U Stokes U

Stokes U parameter

_w Wavelength

Fabry-Perot mosaic from different wavelengths

_xpr X PRofile

Median of each row of the mosaic

_ypr Y PRofile

Median of each column of the mosaic

Deprecated suffices

The following frame suffices were present prior to version 3.0 of Orac-dr.




Suffix Stands for

Description




_dg De-Glitched

Bad pixels replaced by median of neighbours

_sbp Substitute Bad Pixels

Bad pixels replaced (needed for PISA)

_sc SCaled

Data scaled to lie within the range of values allowed by PISA for the object masking


The following mosaic suffices were present prior to version 3.0 of Orac-dr.




Suffix Stands for

Description




_mu Mosaic (Unfiltered)   

Intermediate mosaic (could contain bad/hot pixels)